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Y
Z
M
Musselman K
,
Glynn S
,
Mosquera JMiguel
,
Elemento O
,
Sboner A
,
Beltran H
,
Holcomb K
. 2019.
Identification of a therapeutic target using molecular sequencing for treatment of recurrent uterine serous adenocarcinoma.
.
Gynecol Oncol Rep. 28:54-57.
Mueller FB
,
Yang H
,
Lubetzky M
,
Verma A
,
Lee JR
,
Dadhania DM
,
Xiang JZ
,
Salvatore SP
,
Seshan SV
,
Sharma VK
et al.
. 2019.
Landscape of innate immune system transcriptome and acute T cell-mediated rejection of human kidney allografts.
.
JCI Insight. 4(13)
Morash M
,
Mitchell H
,
Yu A
,
Campion T
,
Beltran H
,
Elemento O
,
Pathak J
. 2018.
CATCH-KB: Establishing a Pharmacogenomics Variant Repository for Chemotherapy-Induced Cardiotoxicity.
.
AMIA Jt Summits Transl Sci Proc. 2017:168-177.
Morash M
,
Mitchell H
,
Beltran H
,
Elemento O
,
Pathak J
. 2018.
The Role of Next-Generation Sequencing in Precision Medicine: A Review of Outcomes in Oncology.
.
J Pers Med. 8(3)
Montrose DC
,
Saha S
,
Foronda M
,
McNally EM
,
Chen J
,
Zhou XKathy
,
Ha T
,
Krumsiek J
,
Buyukozkan M
,
Verma A
et al.
. 2021.
Exogenous and Endogenous Sources of Serine Contribute to Colon Cancer Metabolism, Growth, and Resistance to 5-Fluorouracil.
.
Cancer Res. 81(9):2275-2288.
Meyer KD
,
Patil DP
,
Zhou J
,
Zinoviev A
,
Skabkin MA
,
Elemento O
,
Pestova TV
,
Qian S-B
,
Jaffrey SR
. 2015.
5' UTR m(6)A Promotes Cap-Independent Translation.
.
Cell. 163(4):999-1010.
Meyer KD
,
Saletore Y
,
Zumbo P
,
Elemento O
,
Mason CE
,
Jaffrey SR
. 2012.
Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons.
.
Cell. 149(7):1635-46.
Mendoza A
,
Fang V
,
Chen C
,
Serasinghe M
,
Verma A
,
Muller J
,
V Chaluvadi S
,
Dustin ML
,
Hla T
,
Elemento O
et al.
. 2017.
Lymphatic endothelial S1P promotes mitochondrial function and survival in naive T cells.
.
Nature. 546(7656):158-161.
Meggendorfer M
,
Jobanputra V
,
Wrzeszczynski KO
,
Roepman P
,
de Bruijn E
,
Cuppen E
,
Buttner R
,
Caldas C
,
Grimmond S
,
Mullighan CG
et al.
. 2021.
Analytical demands to use whole-genome sequencing in precision oncology.
.
Semin Cancer Biol.
Mauer J
,
Luo X
,
Blanjoie A
,
Jiao X
,
Grozhik AV
,
Patil DP
,
Linder B
,
Pickering BF
,
Vasseur J-J
,
Chen Q
et al.
. 2017.
Reversible methylation of mA in the 5' cap controls mRNA stability.
.
Nature. 541(7637):371-375.
Matrai C
,
Motanagh S
,
Mirabelli S
,
Ma L
,
He B
,
Chapman-Davis E
,
Kurtis B
,
Elemento O
,
Mosquera JMiguel
,
Ellenson LH
. 2020.
Molecular Profiles of Mixed Endometrial Carcinoma.
.
Am J Surg Pathol. 44(8):1104-1111.
Mason CE
,
Elemento O
. 2012.
Faster sequencers, larger datasets, new challenges.
.
Genome Biol. 13(3):314.
Markowitz GJ
,
Havel LS
,
Crowley MJp
,
Ban Y
,
Lee SB
,
Thalappillil JS
,
Narula N
,
Bhinder B
,
Elemento O
,
Wong STc
et al.
. 2018.
Immune reprogramming via PD-1 inhibition enhances early-stage lung cancer survival.
.
JCI Insight. 3(13)
Marderstein AR
,
Uppal M
,
Verma A
,
Bhinder B
,
Tayyebi Z
,
Mezey J
,
Clark AG
,
Elemento O
. 2020.
Demographic and genetic factors influence the abundance of infiltrating immune cells in human tissues.
.
Nat Commun. 11(1):2213.
Marderstein AR
,
Davenport ER
,
Kulm S
,
Van Hout CV
,
Elemento O
,
Clark AG
. 2021.
Leveraging phenotypic variability to identify genetic interactions in human phenotypes.
.
Am J Hum Genet. 108(1):49-67.
Manohar J
,
Abedian S
,
Martini R
,
Kulm S
,
Salvatore M
,
Ho K
,
Christos P
,
Campion T
,
Imperato-McGinley J
,
Ibrahim S
et al.
. 2021.
Social and Clinical Determinants of COVID-19 Outcomes: Modeling Real-World Data from a Pandemic Epicenter.
.
medRxiv.
Madhukar NS
,
Khade PK
,
Huang L
,
Gayvert K
,
Galletti G
,
Stogniew M
,
Allen JE
,
Giannakakou P
,
Elemento O
. 2019.
A Bayesian machine learning approach for drug target identification using diverse data types.
.
Nat Commun. 10(1):5221.
Madhukar NS
,
Elemento O
,
Pandey G
. 2015.
Prediction of Genetic Interactions Using Machine Learning and Network Properties.
.
Front Bioeng Biotechnol. 3:172.
Madhukar NS
,
Elemento O
. 2018.
Bioinformatics Approaches to Predict Drug Responses from Genomic Sequencing.
.
Methods Mol Biol. 1711:277-296.
Ma J
,
Redmond D
,
Miyaguchi A
,
Nam AS
,
Nie K
,
Mathew S
,
Elemento O
,
Tam W
. 2019.
Exploring tumor clonal evolution in bone marrow of patients with diffuse large B-cell lymphoma by deep IGH sequencing and its potential relevance in relapse.
.
Blood Cancer J. 9(9):69.
L
Lundquist MR
,
Goncalves MD
,
Loughran RM
,
Possik E
,
Vijayaraghavan T
,
Yang A
,
Pauli C
,
Ravi A
,
Verma A
,
Yang Z
et al.
. 2018.
Phosphatidylinositol-5-Phosphate 4-Kinases Regulate Cellular Lipid Metabolism By Facilitating Autophagy.
.
Mol Cell. 70(3):531-544.e9.
Lue JK
,
Prabhu SA
,
Liu Y
,
Gonzalez Y
,
Verma A
,
Mundi PS
,
Abshiru N
,
Camarillo JM
,
Mehta S
,
Chen EI
et al.
. 2019.
Precision Targeting with EZH2 and HDAC Inhibitors in Epigenetically Dysregulated Lymphomas.
.
Clin Cancer Res. 25(17):5271-5283.
Lu Y
,
T Soong D
,
Elemento O
. 2013.
A novel approach for characterizing microsatellite instability in cancer cells.
.
PLoS One. 8(5):e63056.
Lu X
,
Li JM
,
Elemento O
,
Tavazoie S
,
Wieschaus EF
. 2009.
Coupling of zygotic transcription to mitotic control at the Drosophila mid-blastula transition.
.
Development. 136(12):2101-10.
Lu Y-C
,
Chang S-H
,
Hafner M
,
Li X
,
Tuschl T
,
Elemento O
,
Hla T
. 2014.
ELAVL1 modulates transcriptome-wide miRNA binding in murine macrophages.
.
Cell Rep. 9(6):2330-43.
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