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Found 301 results
Author
Title
Type
Year
Journal Article
Pisapia DJ
,
Ohara K
,
Bareja R
,
Wilkes DC
,
Hissong E
,
Croyle JA
,
Kim J-H
,
Saab J
,
MacDonald TY
,
Beg S
et al.
. 2020.
Fusions involving BCOR and CREBBP are rare events in infiltrating glioma.
.
Acta Neuropathol Commun. 8(1):80.
Choi S
,
Wang D
,
Chen X
,
Tang LH
,
Verma A
,
Chen Z
,
Kim BJung
,
Selesner L
,
Robzyk K
,
Zhang G
et al.
. 2019.
Function and clinical relevance of RHAMM isoforms in pancreatic tumor progression.
.
Mol Cancer. 18(1):92.
Reichel JB
,
McCormick J
,
Fromm JR
,
Elemento O
,
Cesarman E
,
Roshal M
. 2017.
Flow-sorting and Exome Sequencing of the Reed-Sternberg Cells of Classical Hodgkin Lymphoma.
.
J Vis Exp. (124)
Reichel J
,
Chadburn A
,
Rubinstein PG
,
Giulino-Roth L
,
Tam W
,
Liu Y
,
Gaiolla R
,
Eng K
,
Brody J
,
Inghirami G
et al.
. 2015.
Flow sorting and exome sequencing reveal the oncogenome of primary Hodgkin and Reed-Sternberg cells.
.
Blood. 125(7):1061-72.
Hess ME
,
Hess S
,
Meyer KD
,
Verhagen LAW
,
Koch L
,
Brönneke HS
,
Dietrich MO
,
Jordan SD
,
Saletore Y
,
Elemento O
et al.
. 2013.
The fat mass and obesity associated gene (Fto) regulates activity of the dopaminergic midbrain circuitry.
.
Nat Neurosci. 16(8):1042-8.
Mason CE
,
Elemento O
. 2012.
Faster sequencers, larger datasets, new challenges.
.
Genome Biol. 13(3):314.
Elemento O
,
Tavazoie S
. 2007.
Fastcompare: a nonalignment approach for genome-scale discovery of DNA and mRNA regulatory elements using network-level conservation.
.
Methods Mol Biol. 395:349-66.
Elemento O
,
Tavazoie S
. 2005.
Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach.
.
Genome Biol. 6(2):R18.
Velichutina I
,
Shaknovich R
,
Geng H
,
Johnson NA
,
Gascoyne RD
,
Melnick AM
,
Elemento O
. 2010.
EZH2-mediated epigenetic silencing in germinal center B cells contributes to proliferation and lymphomagenesis.
.
Blood. 116(24):5247-55.
Bödör C
,
Grossmann V
,
Popov N
,
Okosun J
,
O'Riain C
,
Tan K
,
Marzec J
,
Araf S
,
Wang J
,
Lee AM
et al.
. 2013.
EZH2 mutations are frequent and represent an early event in follicular lymphoma.
.
Blood. 122(18):3165-8.
Béguelin W
,
Popovic R
,
Teater M
,
Jiang Y
,
Bunting KL
,
Rosen M
,
Shen H
,
Yang SNing
,
Wang L
,
Ezponda T
et al.
. 2013.
EZH2 is required for germinal center formation and somatic EZH2 mutations promote lymphoid transformation.
.
Cancer Cell. 23(5):677-92.
Béguelin W
,
Rivas MA
,
Fernandez MTCalvo
,
Teater M
,
Purwada A
,
Redmond D
,
Shen H
,
Challman MF
,
Elemento O
,
Singh A
et al.
. 2017.
EZH2 enables germinal centre formation through epigenetic silencing of CDKN1A and an Rb-E2F1 feedback loop.
.
Nat Commun. 8(1):877.
Béguelin W
,
Teater M
,
Gearhart MD
,
Fernández MTeresa Cal
,
Goldstein RL
,
Cárdenas MG
,
Hatzi K
,
Rosen M
,
Shen H
,
Corcoran CM
et al.
. 2016.
EZH2 and BCL6 Cooperate to Assemble CBX8-BCOR Complex to Repress Bivalent Promoters, Mediate Germinal Center Formation and Lymphomagenesis.
.
Cancer Cell. 30(2):197-213.
Ma J
,
Redmond D
,
Miyaguchi A
,
Nam AS
,
Nie K
,
Mathew S
,
Elemento O
,
Tam W
. 2019.
Exploring tumor clonal evolution in bone marrow of patients with diffuse large B-cell lymphoma by deep IGH sequencing and its potential relevance in relapse.
.
Blood Cancer J. 9(9):69.
Montrose DC
,
Saha S
,
Foronda M
,
McNally EM
,
Chen J
,
Zhou XKathy
,
Ha T
,
Krumsiek J
,
Buyukozkan M
,
Verma A
et al.
. 2021.
Exogenous and Endogenous Sources of Serine Contribute to Colon Cancer Metabolism, Growth, and Resistance to 5-Fluorouracil.
.
Cancer Res. 81(9):2275-2288.
Romanel A
,
Zhang T
,
Elemento O
,
Demichelis F
. 2017.
EthSEQ: ethnicity annotation from whole exome sequencing data.
.
Bioinformatics. 33(15):2402-2404.
Faria M
,
Karami S
,
Granados-Principal S
,
Dey P
,
Verma A
,
Choi DS
,
Elemento O
,
Bawa-Khalfe T
,
Chang JC
,
Strom AM
et al.
. 2018.
The ERβ4 variant induces transformation of the normal breast mammary epithelial cell line MCF-10A; the ERβ variants ERβ2 and ERβ5 increase aggressiveness of TNBC by regulation of hypoxic signaling.
.
Oncotarget. 9(15):12201-12211.
Sfakianos JP
,
Daza J
,
Hu Y
,
Anastos H
,
Bryant G
,
Bareja R
,
Badani KK
,
Galsky MD
,
Elemento O
,
Faltas BM
et al.
. 2020.
Epithelial plasticity can generate multi-lineage phenotypes in human and murine bladder cancers.
.
Nat Commun. 11(1):2540.
Pan H
,
Jiang Y
,
Boi M
,
Tabbò F
,
Redmond D
,
Nie K
,
Ladetto M
,
Chiappella A
,
Cerchietti L
,
Shaknovich R
et al.
. 2015.
Epigenomic evolution in diffuse large B-cell lymphomas.
.
Nat Commun. 6:6921.
Xylinas E
,
Hassler MR
,
Zhuang D
,
Krzywinski M
,
Erdem Z
,
Robinson BD
,
Elemento O
,
Clozel T
,
Shariat SF
. 2016.
An Epigenomic Approach to Improving Response to Neoadjuvant Cisplatin Chemotherapy in Bladder Cancer.
.
Biomolecules. 6(3)
Lin P-C
,
Giannopoulou EG
,
Park K
,
Mosquera JMiguel
,
Sboner A
,
Tewari AK
,
Garraway LA
,
Beltran H
,
Rubin MA
,
Elemento O
. 2013.
Epigenomic alterations in localized and advanced prostate cancer.
.
Neoplasia. 15(4):373-83.
Dalton T
,
Doubrovina E
,
Pankov D
,
Reynolds R
,
Scholze H
,
Selvakumar A
,
Vizconde T
,
Savalia B
,
Dyomin V
,
Weigel C
et al.
. 2020.
Epigenetic reprogramming sensitizes immunologically silent EBV+ lymphomas to virus-directed immunotherapy.
.
Blood. 135(21):1870-1881.
Lin P-C
,
Chiu Y-L
,
Banerjee S
,
Park K
,
Mosquera JMiguel
,
Giannopoulou E
,
Alves P
,
Tewari AK
,
Gerstein MB
,
Beltran H
et al.
. 2013.
Epigenetic repression of miR-31 disrupts androgen receptor homeostasis and contributes to prostate cancer progression.
.
Cancer Res. 73(3):1232-44.
Liu Y
,
Giannopoulou EG
,
Wen D
,
Falciatori I
,
Elemento O
,
C Allis D
,
Rafii S
,
Seandel M
. 2016.
Epigenetic profiles signify cell fate plasticity in unipotent spermatogonial stem and progenitor cells.
.
Nat Commun. 7:11275.
Glass JL
,
Hassane D
,
Wouters BJ
,
Kunimoto H
,
Avellino R
,
Garrett-Bakelman FE
,
Guryanova OA
,
Bowman R
,
Redlich S
,
Intlekofer AM
et al.
. 2017.
Epigenetic Identity in AML Depends on Disruption of Nonpromoter Regulatory Elements and Is Affected by Antagonistic Effects of Mutations in Epigenetic Modifiers.
.
Cancer Discov. 7(8):868-883.
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