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S
T
U
V
W
X
Y
Z
M
Musselman K
,
Glynn S
,
Mosquera JMiguel
,
Elemento O
,
Sboner A
,
Beltran H
,
Holcomb K
. 2019.
Identification of a therapeutic target using molecular sequencing for treatment of recurrent uterine serous adenocarcinoma.
.
Gynecol Oncol Rep. 28:54-57.
N
Napoli S
,
Cascione L
,
Rinaldi A
,
Spriano F
,
Guidetti F
,
Zhang F
,
Cacciapuoti MTeresa
,
Mensah AAdjeiwaa
,
Sartori G
,
Munz N
et al.
. 2021.
Characterization of GECPAR, a noncoding RNA that regulates the transcriptional program of diffuse large B cell lymphoma.
.
Haematologica.
Nayar U
,
Sadek J
,
Reichel J
,
Hernandez-Hopkins D
,
Akar G
,
Barelli PJ
,
Sahai MA
,
Zhou H
,
Totonchy J
,
Jayabalan D
et al.
. 2017.
Identification of a nucleoside analog active against adenosine kinase-expressing plasma cell malignancies.
.
J Clin Invest. 127(6):2066-2080.
Nie K
,
Redmond D
,
Eng KW
,
Zhang T
,
Cheng S
,
Mathew S
,
Elemento O
,
Tam W
. 2021.
Mutation landscape, clonal evolution pattern, and potential pathogenic pathways in B-lymphoblastic transformation of follicular lymphoma.
.
Leukemia. 35(4):1203-1208.
Nolan DJ
,
Ginsberg M
,
Israely E
,
Palikuqi B
,
Poulos MG
,
James D
,
Ding B-S
,
Schachterle W
,
Liu Y
,
Rosenwaks Z
et al.
. 2013.
Molecular signatures of tissue-specific microvascular endothelial cell heterogeneity in organ maintenance and regeneration.
.
Dev Cell. 26(2):204-19.
Nwachukwu JC
,
Srinivasan S
,
Zheng Y
,
Wang S
,
Min J
,
Dong C
,
Liao Z
,
Nowak J
,
Wright NJ
,
Houtman R
et al.
. 2016.
Predictive features of ligand-specific signaling through the estrogen receptor.
.
Mol Syst Biol. 12(4):864.
Nwachukwu JC
,
Srinivasan S
,
Bruno NE
,
Nowak J
,
Wright NJ
,
Minutolo F
,
Rangarajan ES
,
Izard T
,
Yao X-Q
,
Grant BJ
et al.
. 2017.
Systems Structural Biology Analysis of Ligand Effects on ERα Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies.
.
Cell Chem Biol. 24(1):35-45.
O
Ortega-Molina A
,
Boss IW
,
Canela A
,
Pan H
,
Jiang Y
,
Zhao C
,
Jiang M
,
Hu D
,
Agirre X
,
Niesvizky I
et al.
. 2015.
The histone lysine methyltransferase KMT2D sustains a gene expression program that represses B cell lymphoma development.
.
Nat Med. 21(10):1199-208.
P
Page DB
,
Yuan J
,
Redmond D
,
Y Wen H
,
Durack JC
,
Emerson R
,
Solomon S
,
Dong Z
,
Wong P
,
Comstock C
et al.
. 2016.
Deep Sequencing of T-cell Receptor DNA as a Biomarker of Clonally Expanded TILs in Breast Cancer after Immunotherapy.
.
Cancer Immunol Res. 4(10):835-844.
Pan H
,
Renaud L
,
Chaligne R
,
Bloehdorn J
,
Tausch E
,
Mertens D
,
Fink AMaria
,
Fischer K
,
Zhang C
,
Betel D
et al.
. 2021.
Discovery of candidate DNA methylation cancer driver genes.
.
Cancer Discov.
Pan H
,
Elemento O
. 2018.
Analyzing DNA Methylation Patterns During Tumor Evolution.
.
Methods Mol Biol. 1711:27-53.
Pan H
,
Jiang Y
,
Boi M
,
Tabbò F
,
Redmond D
,
Nie K
,
Ladetto M
,
Chiappella A
,
Cerchietti L
,
Shaknovich R
et al.
. 2015.
Epigenomic evolution in diffuse large B-cell lymphomas.
.
Nat Commun. 6:6921.
Park J
,
Foox J
,
Hether T
,
Danko D
,
Warren S
,
Kim Y
,
Reeves J
,
Butler DJ
,
Mozsary C
,
Rosiene J
et al.
. 2021.
Systemic Tissue and Cellular Disruption from SARS-CoV-2 Infection revealed in COVID-19 Autopsies and Spatial Omics Tissue Maps.
.
bioRxiv.
Park K
,
Tran H
,
Eng KW
,
Ramazanoglu S
,
Rolon RMMarrero
,
Scognamiglio T
,
Borczuk A
,
Mosquera JMiguel
,
Pan Q
,
Sboner A
et al.
. 2020.
Performance Characteristics of a Targeted Sequencing Platform for Simultaneous Detection of Single Nucleotide Variants, Insertions/Deletions, Copy Number Alterations, and Gene Fusions in Cancer Genome.
.
Arch Pathol Lab Med.
Patnaik A
,
Swanson KD
,
Csizmadia E
,
Solanki A
,
Landon-Brace N
,
Gehring MP
,
Helenius K
,
Olson BM
,
Pyzer AR
,
Wang LC
et al.
. 2017.
Cabozantinib Eradicates Advanced Murine Prostate Cancer by Activating Antitumor Innate Immunity.
.
Cancer Discov. 7(7):750-765.
Pauli C
,
Hopkins BD
,
Prandi D
,
Shaw R
,
Fedrizzi T
,
Sboner A
,
Sailer V
,
Augello M
,
Puca L
,
Rosati R
et al.
. 2017.
Personalized and Cancer Models to Guide Precision Medicine.
.
Cancer Discov. 7(5):462-477.
Pine AR
,
Cirigliano SM
,
Nicholson JG
,
Hu Y
,
Linkous A
,
Miyaguchi K
,
Edwards L
,
Singhania R
,
Schwartz TH
,
Ramakrishna R
et al.
. 2020.
Tumor Microenvironment Is Critical for the Maintenance of Cellular States Found in Primary Glioblastomas.
.
Cancer Discov. 10(7):964-979.
Pisapia DJ
,
Salvatore S
,
Pauli C
,
Hissong E
,
Eng K
,
Prandi D
,
Sailer V-W
,
Robinson BD
,
Park K
,
Cyrta J
et al.
. 2017.
Next-Generation Rapid Autopsies Enable Tumor Evolution Tracking and Generation of Preclinical Models.
.
JCO Precis Oncol. 2017
Pisapia DJ
,
Ohara K
,
Bareja R
,
Wilkes DC
,
Hissong E
,
Croyle JA
,
Kim J-H
,
Saab J
,
MacDonald TY
,
Beg S
et al.
. 2020.
Fusions involving BCOR and CREBBP are rare events in infiltrating glioma.
.
Acta Neuropathol Commun. 8(1):80.
Popovic R
,
Martinez-Garcia E
,
Giannopoulou EG
,
Zhang Q
,
Zhang Q
,
Ezponda T
,
Shah MY
,
Zheng Y
,
Will CM
,
Small EC
et al.
. 2014.
Histone methyltransferase MMSET/NSD2 alters EZH2 binding and reprograms the myeloma epigenome through global and focal changes in H3K36 and H3K27 methylation.
.
PLoS Genet. 10(9):e1004566.
Poran A
,
Nötzel C
,
Aly O
,
Mencia-Trinchant N
,
Harris CT
,
Guzman ML
,
Hassane DC
,
Elemento O
,
Kafsack BFC
. 2017.
Single-cell RNA sequencing reveals a signature of sexual commitment in malaria parasites.
.
Nature. 551(7678):95-99.
Poulos MG
,
Crowley MJP
,
Gutkin MC
,
Ramalingam P
,
Schachterle W
,
Thomas J-L
,
Elemento O
,
Butler JM
. 2015.
Vascular Platform to Define Hematopoietic Stem Cell Factors and Enhance Regenerative Hematopoiesis.
.
Stem Cell Reports. 5(5):881-894.
Poulos MG
,
Ramalingam P
,
Gutkin MC
,
Kleppe M
,
Ginsberg M
,
Crowley MJP
,
Elemento O
,
Levine RL
,
Rafii S
,
Kitajewski J
et al.
. 2016.
Endothelial-specific inhibition of NF-κB enhances functional haematopoiesis.
.
Nat Commun. 7:13829.
Powles RL
,
Redmond D
,
Sotiriou C
,
Loi S
,
Fumagalli D
,
Nuciforo P
,
Harbeck N
,
de Azambuja E
,
Sarp S
,
Di Cosimo S
et al.
. 2018.
Association of T-Cell Receptor Repertoire Use With Response to Combined Trastuzumab-Lapatinib Treatment of HER2-Positive Breast Cancer: Secondary Analysis of the NeoALTTO Randomized Clinical Trial.
.
JAMA Oncol. 4(11):e181564.
Prabhu VV
,
Lulla AR
,
Madhukar NS
,
Ralff MD
,
Zhao D
,
Kline CLeah B
,
A Van den Heuvel PJ
,
Lev A
,
Garnett MJ
,
McDermott U
et al.
. 2017.
Cancer stem cell-related gene expression as a potential biomarker of response for first-in-class imipridone ONC201 in solid tumors.
.
PLoS One. 12(8):e0180541.
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