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Elemento, Olivier
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2021
Rivas MA
,
Meydan C
,
Chin CR
,
Challman MF
,
Kim D
,
Bhinder B
,
Kloetgen A
,
Viny AD
,
Teater MR
,
McNally DR
et al.
. 2021.
Smc3 dosage regulates B cell transit through germinal centers and restricts their malignant transformation.
.
Nat Immunol. 22(2):240-253.
Manohar J
,
Abedian S
,
Martini R
,
Kulm S
,
Salvatore M
,
Ho K
,
Christos P
,
Campion T
,
Imperato-McGinley J
,
Ibrahim S
et al.
. 2021.
Social and Clinical Determinants of COVID-19 Outcomes: Modeling Real-World Data from a Pandemic Epicenter.
.
medRxiv.
Rendeiro AF
,
Ravichandran H
,
Bram Y
,
Chandar V
,
Kim J
,
Meydan C
,
Park J
,
Foox J
,
Hether T
,
Warren S
et al.
. 2021.
The spatial landscape of lung pathology during COVID-19 progression.
.
Nature. 593(7860):564-569.
Park J
,
Foox J
,
Hether T
,
Danko D
,
Warren S
,
Kim Y
,
Reeves J
,
Butler DJ
,
Mozsary C
,
Rosiene J
et al.
. 2021.
Systemic Tissue and Cellular Disruption from SARS-CoV-2 Infection revealed in COVID-19 Autopsies and Spatial Omics Tissue Maps.
.
bioRxiv.
Sugita M
,
Wilkes DC
,
Bareja R
,
Eng KW
,
Nataraj S
,
Jimenez-Flores RA
,
Yan LB
,
De Leon JPauline
,
Croyle JA
,
Kaner J
et al.
. 2021.
Targeting the epichaperome as an effective precision medicine approach in a novel PML-SYK fusion acute myeloid leukemia.
.
NPJ Precis Oncol. 5(1):44.
Brady NJ
,
Bagadion AM
,
Singh R
,
Conteduca V
,
Van Emmenis L
,
Arceci E
,
Pakula H
,
Carelli R
,
Khani F
,
Bakht M
et al.
. 2021.
Temporal evolution of cellular heterogeneity during the progression to advanced AR-negative prostate cancer.
.
Nat Commun. 12(1):3372.
Elemento O
. 2021.
Towards artificial intelligence-driven pathology assessment for hematological malignancies.
.
Blood Cancer Discov. 2(3):195-197.
Carrot-Zhang J
,
Yao X
,
Devarakonda S
,
Deshpande A
,
Damrauer JS
,
Silva TChedraoui
,
Wong CK
,
Choi HYoung
,
Felau I
,
A Robertson G
et al.
. 2021.
Whole-genome characterization of lung adenocarcinomas lacking alterations in the RTK/RAS/RAF pathway.
.
Cell Rep. 34(8):108784.
Carrot-Zhang J
,
Yao X
,
Devarakonda S
,
Deshpande A
,
Damrauer JS
,
Silva TChedraoui
,
Wong CK
,
Choi HYoung
,
Felau I
,
A Robertson G
et al.
. 2021.
Whole-genome characterization of lung adenocarcinomas lacking the RTK/RAS/RAF pathway.
.
Cell Rep. 34(5):108707.
2020
Casiraghi N
,
Orlando F
,
Ciani Y
,
Xiang J
,
Sboner A
,
Elemento O
,
Attard G
,
Beltran H
,
Demichelis F
,
Romanel A
. 2020.
ABEMUS: platform-specific and data-informed detection of somatic SNVs in cfDNA.
.
Bioinformatics. 36(9):2665-2674.
Ginter PS
,
McIntire PJ
,
Kurtis B
,
Mirabelli S
,
Motanagh S
,
Hoda S
,
Elemento O
,
Shin SJ
,
Mosquera JMiguel
. 2020.
Adenomyoepithelial tumors of the breast: molecular underpinnings of a rare entity.
.
Mod Pathol.
Segal E
,
Zhang F
,
Lin X
,
King G
,
Shalem O
,
Shilo S
,
Allen WE
,
Alquaddoomi F
,
Altae-Tran H
,
Anders S
et al.
. 2020.
Building an international consortium for tracking coronavirus health status.
.
Nat Med. 26(8):1161-1165.
Hwang I
,
Pan H
,
Yao J
,
Elemento O
,
Zheng H
,
Paik J
. 2020.
CIC is a critical regulator of neuronal differentiation.
.
JCI Insight. 5(9)
Beltran H
,
Romanel A
,
Conteduca V
,
Casiraghi N
,
Sigouros M
,
Franceschini GMarco
,
Orlando F
,
Fedrizzi T
,
Ku S-Y
,
Dann E
et al.
. 2020.
Circulating tumor DNA profile recognizes transformation to castration-resistant neuroendocrine prostate cancer.
.
J Clin Invest. 130(4):1653-1668.
Kolin DA
,
Kulm S
,
Elemento O
. 2020.
Clinical and Genetic Characteristics of Covid-19 Patients from UK Biobank.
.
medRxiv.
Vosoughi A
,
Zhang T
,
Shohdy KS
,
Vlachostergios PJ
,
Wilkes DC
,
Bhinder B
,
Tagawa ST
,
Nanus DM
,
Molina AM
,
Beltran H
et al.
. 2020.
Common germline-somatic variant interactions in advanced urothelial cancer.
.
Nat Commun. 11(1):6195.
Bhinder B
,
Elemento O
. 2020.
Computational methods in tumor immunology.
.
Methods Enzymol. 636:209-259.
Marderstein AR
,
Uppal M
,
Verma A
,
Bhinder B
,
Tayyebi Z
,
Mezey J
,
Clark AG
,
Elemento O
. 2020.
Demographic and genetic factors influence the abundance of infiltrating immune cells in human tissues.
.
Nat Commun. 11(1):2213.
Lourenco ARita
,
Ban Y
,
Crowley MJ
,
Lee SB
,
Ramchandani D
,
Du W
,
Elemento O
,
George JT
,
Jolly MKumar
,
Levine H
et al.
. 2020.
Differential Contributions of Pre- and Post-EMT Tumor Cells in Breast Cancer Metastasis.
.
Cancer Res. 80(2):163-169.
Dalton T
,
Doubrovina E
,
Pankov D
,
Reynolds R
,
Scholze H
,
Selvakumar A
,
Vizconde T
,
Savalia B
,
Dyomin V
,
Weigel C
et al.
. 2020.
Epigenetic reprogramming sensitizes immunologically silent EBV+ lymphomas to virus-directed immunotherapy.
.
Blood. 135(21):1870-1881.
Sfakianos JP
,
Daza J
,
Hu Y
,
Anastos H
,
Bryant G
,
Bareja R
,
Badani KK
,
Galsky MD
,
Elemento O
,
Faltas BM
et al.
. 2020.
Epithelial plasticity can generate multi-lineage phenotypes in human and murine bladder cancers.
.
Nat Commun. 11(1):2540.
Pisapia DJ
,
Ohara K
,
Bareja R
,
Wilkes DC
,
Hissong E
,
Croyle JA
,
Kim J-H
,
Saab J
,
MacDonald TY
,
Beg S
et al.
. 2020.
Fusions involving BCOR and CREBBP are rare events in infiltrating glioma.
.
Acta Neuropathol Commun. 8(1):80.
Elemento O
. 2020.
The future of precision medicine: towards a more predictive personalized medicine.
.
Emerg Top Life Sci. 4(2):175-177.
Sun M
,
Zhao S
,
Gilvary C
,
Elemento O
,
Zhou J
,
Wang F
. 2020.
Graph convolutional networks for computational drug development and discovery.
.
Brief Bioinform. 21(3):919-935.
Xie XP
,
Laks DR
,
Sun D
,
Poran A
,
Laughney AM
,
Wang Z
,
Sam J
,
Belenguer G
,
Fariñas I
,
Elemento O
et al.
. 2020.
High-resolution mouse subventricular zone stem-cell niche transcriptome reveals features of lineage, anatomy, and aging.
.
Proc Natl Acad Sci U S A. 117(49):31448-31458.
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