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Found 44 results
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Sboner, Andrea
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Beltran H
,
Eng K
,
Mosquera JMiguel
,
Sigaras A
,
Romanel A
,
Rennert H
,
Kossai M
,
Pauli C
,
Faltas B
,
Fontugne J
et al.
. 2015.
Whole-Exome Sequencing of Metastatic Cancer and Biomarkers of Treatment Response.
.
JAMA Oncol. 1(4):466-74.
T
Brady NJ
,
Bagadion AM
,
Singh R
,
Conteduca V
,
Van Emmenis L
,
Arceci E
,
Pakula H
,
Carelli R
,
Khani F
,
Bakht M
et al.
. 2021.
Temporal evolution of cellular heterogeneity during the progression to advanced AR-negative prostate cancer.
.
Nat Commun. 12(1):3372.
Sugita M
,
Wilkes DC
,
Bareja R
,
Eng KW
,
Nataraj S
,
Jimenez-Flores RA
,
Yan LB
,
De Leon JPauline
,
Croyle JA
,
Kaner J
et al.
. 2021.
Targeting the epichaperome as an effective precision medicine approach in a novel PML-SYK fusion acute myeloid leukemia.
.
NPJ Precis Oncol. 5(1):44.
S
Manohar J
,
Abedian S
,
Martini R
,
Kulm S
,
Salvatore M
,
Ho K
,
Christos P
,
Campion T
,
Imperato-McGinley J
,
Ibrahim S
et al.
. 2021.
Social and Clinical Determinants of COVID-19 Outcomes: Modeling Real-World Data from a Pandemic Epicenter.
.
medRxiv.
Auguste A
,
Blanc-Durand F
,
Deloger M
,
Le Formal A
,
Bareja R
,
Wilkes DC
,
Richon C
,
Brunn B
,
Caron O
,
Devouassoux-Shisheboran M
et al.
. 2020.
Small Cell Carcinoma of the Ovary, Hypercalcemic Type (SCCOHT) beyond Mutations: A Comprehensive Genomic Analysis.
.
Cells. 9(6)
Conteduca V
,
Ku S-Y
,
Puca L
,
Slade M
,
Fernandez L
,
Hess J
,
Bareja R
,
Vlachostergios PJ
,
Sigouros M
,
Mosquera JMiguel
et al.
. 2020.
SLFN11 Expression in Advanced Prostate Cancer and Response to Platinum-based Chemotherapy.
.
Mol Cancer Ther. 19(5):1157-1164.
P
Baca SC
,
Prandi D
,
Lawrence MS
,
Mosquera JMiguel
,
Romanel A
,
Drier Y
,
Park K
,
Kitabayashi N
,
MacDonald TY
,
Ghandi M
et al.
. 2013.
Punctuated evolution of prostate cancer genomes.
.
Cell. 153(3):666-77.
Segal E
,
Zhang F
,
Lin X
,
King G
,
Shalem O
,
Shilo S
,
Allen WE
,
Alquaddoomi F
,
Altae-Tran H
,
Anders S
et al.
. 2020.
Publisher Correction: Building an international consortium for tracking coronavirus health status.
.
Nat Med. 26(8):1309.
Sboner A
,
Elemento O
. 2016.
A primer on precision medicine informatics.
.
Brief Bioinform. 17(1):145-53.
Pauli C
,
Hopkins BD
,
Prandi D
,
Shaw R
,
Fedrizzi T
,
Sboner A
,
Sailer V
,
Augello M
,
Puca L
,
Rosati R
et al.
. 2017.
Personalized and Cancer Models to Guide Precision Medicine.
.
Cancer Discov. 7(5):462-477.
Park K
,
Tran H
,
Eng KW
,
Ramazanoglu S
,
Rolon RMMarrero
,
Scognamiglio T
,
Borczuk A
,
Mosquera JMiguel
,
Pan Q
,
Sboner A
et al.
. 2020.
Performance Characteristics of a Targeted Sequencing Platform for Simultaneous Detection of Single Nucleotide Variants, Insertions/Deletions, Copy Number Alterations, and Gene Fusions in Cancer Genome.
.
Arch Pathol Lab Med.
Puca L
,
Bareja R
,
Prandi D
,
Shaw R
,
Benelli M
,
Karthaus WR
,
Hess J
,
Sigouros M
,
Donoghue A
,
Kossai M
et al.
. 2018.
Patient derived organoids to model rare prostate cancer phenotypes.
.
Nat Commun. 9(1):2404.
O
Karass M
,
Bareja R
,
Shelkey E
,
Vlachostergios PJ
,
Robinson BD
,
Khani F
,
Mosquera JMiguel
,
Scherr DS
,
Sboner A
,
Tagawa ST
et al.
. 2019.
Oncogenic Addiction to ERBB2 Signaling Predicts Response to Trastuzumab in Urothelial Cancer.
.
J Natl Compr Canc Netw. 17(3):194-200.
Chakravarty D
,
Sboner A
,
Nair SS
,
Giannopoulou E
,
Li R
,
Hennig S
,
Mosquera JMiguel
,
Pauwels J
,
Park K
,
Kossai M
et al.
. 2014.
The oestrogen receptor alpha-regulated lncRNA NEAT1 is a critical modulator of prostate cancer.
.
Nat Commun. 5:5383.
N
Berger A
,
Brady NJ
,
Bareja R
,
Robinson B
,
Conteduca V
,
Augello MA
,
Puca L
,
Ahmed A
,
Dardenne E
,
Lu X
et al.
. 2019.
N-Myc-mediated epigenetic reprogramming drives lineage plasticity in advanced prostate cancer.
.
J Clin Invest. 129(9):3924-3940.
Dardenne E
,
Beltran H
,
Benelli M
,
Gayvert K
,
Berger A
,
Puca L
,
Cyrta J
,
Sboner A
,
Noorzad Z
,
MacDonald T
et al.
. 2016.
N-Myc Induces an EZH2-Mediated Transcriptional Program Driving Neuroendocrine Prostate Cancer.
.
Cancer Cell. 30(4):563-577.
Pisapia DJ
,
Salvatore S
,
Pauli C
,
Hissong E
,
Eng K
,
Prandi D
,
Sailer V-W
,
Robinson BD
,
Park K
,
Cyrta J
et al.
. 2017.
Next-Generation Rapid Autopsies Enable Tumor Evolution Tracking and Generation of Preclinical Models.
.
JCO Precis Oncol. 2017
L
Kaya C
,
Dorsaint P
,
Mercurio S
,
Campbell AM
,
Eng KWha
,
Nikiforova MN
,
Elemento O
,
Nikiforov YE
,
Sboner A
. 2021.
Limitations of Detecting Genetic Variants from the RNA Sequencing Data in Tissue and Fine-Needle Aspiration Samples.
.
Thyroid. 31(4):589-595.
I
Liu D
,
Shoag JE
,
Poliak D
,
Goueli RS
,
Ravikumar V
,
Redmond D
,
Vosoughi A
,
Fontugne J
,
Pan H
,
Lee D
et al.
. 2020.
Integrative multiplatform molecular profiling of benign prostatic hyperplasia identifies distinct subtypes.
.
Nat Commun. 11(1):1987.
Sailer V
,
Eng KWa
,
Zhang T
,
Bareja R
,
Pisapia DJ
,
Sigaras A
,
Bhinder B
,
Romanel A
,
Wilkes D
,
Sticca E
et al.
. 2019.
Integrative Molecular Analysis of Patients With Advanced and Metastatic Cancer.
.
JCO Precis Oncol. 3
Robinson D
,
Van Allen EM
,
Wu Y-M
,
Schultz N
,
Lonigro RJ
,
Mosquera J-M
,
Montgomery B
,
Taplin M-E
,
Pritchard CC
,
Attard G
et al.
. 2015.
Integrative Clinical Genomics of Advanced Prostate Cancer.
.
Cell. 162(2):454.
Robinson D
,
Van Allen EM
,
Wu Y-M
,
Schultz N
,
Lonigro RJ
,
Mosquera J-M
,
Montgomery B
,
Taplin M-E
,
Pritchard CC
,
Attard G
et al.
. 2015.
Integrative Clinical Genomics of Advanced Prostate Cancer.
.
Cell. 162(2):454.
Beg S
,
Bareja R
,
Ohara K
,
Eng KWha
,
Wilkes DC
,
Pisapia DJ
,
Zoughbi WAl
,
Kudman S
,
Zhang W
,
Rao R
et al.
. 2021.
Integration of whole-exome and anchored PCR-based next generation sequencing significantly increases detection of actionable alterations in precision oncology.
.
Transl Oncol. 14(1):100944.
Romanel A
,
Garritano S
,
Stringa B
,
Blattner M
,
Dalfovo D
,
Chakravarty D
,
Soong D
,
Cotter KA
,
Petris G
,
Dhingra P
et al.
. 2017.
Inherited determinants of early recurrent somatic mutations in prostate cancer.
.
Nat Commun. 8(1):48.
Davis M
,
Martini R
,
Newman L
,
Elemento O
,
White J
,
Verma A
,
Datta I
,
Adrianto I
,
Chen Y
,
Gardner K
et al.
. 2020.
Identification of Distinct Heterogenic Subtypes and Molecular Signatures Associated with African Ancestry in Triple Negative Breast Cancer Using Quantified Genetic Ancestry Models in Admixed Race Populations.
.
Cancers (Basel). 12(5)
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